Uncertainty Estimation via Response Scaling for Pseudo-mask Noise Mitigation in Weakly-supervised Semantic Segmentation

Related tags

Deep LearningURN
Overview

Uncertainty Estimation via Response Scaling for Pseudo-mask Noise Mitigation in Weakly-supervised Semantic Segmentation

Introduction

This is a PyTorch implementation of Uncertainty Estimation via Response Scaling for Pseudo-mask Noise Mitigation in Weakly-supervised Semantic Segmentation (AAAI2022), based on mmsegmentation. Please refer the classification phase to PMM and refer the segmentation phase to WSSS_MMSeg.

In this papper, we mitigate the noise of pseudo-mask in segmentation phase via uncertainty from response scaling which simulates the behavior of noise. This technique is applicable to all weakly-supervised semantic segmentation methods based on fully-supervised semantic segmentation.

Uncertainty visualization uncertainty visualization

Framework visualization framework visualization

Preparation

(Extract code of BaiduYun: mtci)

Datasets and pretrained weights

VOC12 OneDrive, BaiduYun; COCO14 BaiduYun; Pretrained weights OneDrive, BaiduYun

Pseduo-masks from classification phase

Pseudo-masks (if you want to skip cls phase), VOC12 OneDrive, COCO14 BaiduYun

Intermediate segmentation weights for uncertainty and cyclic pseudo-mask

Intermediate weights (if you want to skip first segmentation), BaiduYun

Released segmentation weights for test and visualization

Released weights, BaiduYun

Once downloaded, execute the following commands to link the datasets and weights.

git clone https://github.com/XMed-Lab/URN.git
cd URN
mkdir data
cd  data
ln -s [path to model files] models
ln -s [path to voc12] voc12
ln -s [path to coco2014] coco2014
ln -s [path to your voc pseudo-mask] voc12/VOC2012/ppmg
ln -s [path to your coco pseudo-mask] coco2014/voc_format/ppmg

Run the code

(If you don't run on server cluster based on srun, please modify the scripts "tools/dist_*.sh" refer to given scripts "tools/srun_*.sh")

Installation
cd URN
pip install mmcv==1.1.5
pip install -e .

(If you meet installation problems, please refer to mmsegmentation)

Train segmentation for the first time (you can skip it by intermediate weights)
cd URN
bash tools/slurm_train.sh [cluster partition] python configs/pspnet_wsss/pspnet_res2net_20k_voc12aug_pus.py work_dirs/voc12_r2n_pus 8
Uncertainty estimation and generate cyclic pseudo-mask
bash tools/slurm_test.sh [cluster partition] python configs/pspnet_wsss/pspnet_res2net_20k_voc12aug_uncertainty.py [intermediate weights] 8
Train segmentation with reweight strategy
bash tools/slurm_train.sh [cluster partition] python configs/pspnet_wsss/pspnet_res2net_20k_voc12aug_urn.py work_dirs/voc12_r2n_urn 8
Notes:
  1. We provide other backbones, including ResNet101, ScaleNet101, Wide-ResNet38
  2. Configs of COCO14 are provided in "configs/pspnet_wsss"
  3. It's suggested to use multiple cluster nodes to accelerate the genetation of pseudo-mask when use "tools/slurm_test.sh"
  4. Run "tools/run_pmm.sh" to get baselines of PMM

License

Please refer to: LICENSE.

Owner
XMed-Lab
Medical AI and Computer Vision Group, HKUST
XMed-Lab
This repository contains code demonstrating the methods outlined in Path Signature Area-Based Causal Discovery in Coupled Time Series presented at Causal Analysis Workshop 2021.

signed-area-causal-inference This repository contains code demonstrating the methods outlined in Path Signature Area-Based Causal Discovery in Coupled

Will Glad 1 Mar 11, 2022
Code of paper Interact, Embed, and EnlargE (IEEE): Boosting Modality-specific Representations for Multi-Modal Person Re-identification.

Interact, Embed, and EnlargE (IEEE): Boosting Modality-specific Representations for Multi-Modal Person Re-identification We provide the codes for repr

12 Dec 12, 2022
Supervised 3D Pre-training on Large-scale 2D Natural Image Datasets for 3D Medical Image Analysis

Introduction This is an implementation of our paper Supervised 3D Pre-training on Large-scale 2D Natural Image Datasets for 3D Medical Image Analysis.

24 Dec 06, 2022
Code for Piggyback: Adapting a Single Network to Multiple Tasks by Learning to Mask Weights

Piggyback: https://arxiv.org/abs/1801.06519 Pretrained masks and backbones are available here: https://uofi.box.com/s/c5kixsvtrghu9yj51yb1oe853ltdfz4q

Arun Mallya 165 Nov 22, 2022
A PyTorch implementation of QANet.

QANet-pytorch NOTICE I'm very busy these months. I'll return to this repo in about 10 days. Introduction An implementation of QANet with PyTorch. Any

H. Z. 343 Nov 03, 2022
Denoising Normalizing Flow

Denoising Normalizing Flow Christian Horvat and Jean-Pascal Pfister 2021 We combine Normalizing Flows (NFs) and Denoising Auto Encoder (DAE) by introd

CHrvt 17 Oct 15, 2022
Retrieve and analysis data from SDSS (Sloan Digital Sky Survey)

Author: Behrouz Safari License: MIT sdss A python package for retrieving and analysing data from SDSS (Sloan Digital Sky Survey) Installation Install

Behrouz 3 Oct 28, 2022
Implementation of "Efficient Regional Memory Network for Video Object Segmentation" (Xie et al., CVPR 2021).

RMNet This repository contains the source code for the paper Efficient Regional Memory Network for Video Object Segmentation. Cite this work @inprocee

Haozhe Xie 76 Dec 14, 2022
CVPR 2021: "The Spatially-Correlative Loss for Various Image Translation Tasks"

Spatially-Correlative Loss arXiv | website We provide the Pytorch implementation of "The Spatially-Correlative Loss for Various Image Translation Task

Chuanxia Zheng 89 Jan 04, 2023
The second project in Python course on FCC

Assignment Write a function named add_time that takes in two required parameters and one optional parameter: a start time in the 12-hour clock format

Denise T 1 Dec 13, 2021
Independent and minimal implementations of some reinforcement learning algorithms using PyTorch (including PPO, A3C, A2C, ...).

PyTorch RL Minimal Implementations There are implementations of some reinforcement learning algorithms, whose characteristics are as follow: Less pack

Gemini Light 4 Dec 31, 2022
Cmsc11 arcade - Final Project for CMSC11

cmsc11_arcade Final Project for CMSC11 Developers: Limson, Mark Vincent Peñafiel

Gregory 1 Jan 18, 2022
I-BERT: Integer-only BERT Quantization

I-BERT: Integer-only BERT Quantization HuggingFace Implementation I-BERT is also available in the master branch of HuggingFace! Visit the following li

Sehoon Kim 139 Dec 27, 2022
Assessing the Influence of Models on the Performance of Reinforcement Learning Algorithms applied on Continuous Control Tasks

Assessing the Influence of Models on the Performance of Reinforcement Learning Algorithms applied on Continuous Control Tasks This is the master thesi

Giacomo Arcieri 1 Mar 21, 2022
Consecutive-Subsequence - Simple software to calculate susequence with highest sum

Simple software to calculate susequence with highest sum This repository contain

Gbadamosi Farouk 1 Jan 31, 2022
Python3 / PyTorch implementation of the following paper: Fine-grained Semantics-aware Representation Enhancement for Self-supervisedMonocular Depth Estimation. ICCV 2021 (oral)

FSRE-Depth This is a Python3 / PyTorch implementation of FSRE-Depth, as described in the following paper: Fine-grained Semantics-aware Representation

77 Dec 28, 2022
YOLOX-Paddle - A reproduction of YOLOX by PaddlePaddle

YOLOX-Paddle A reproduction of YOLOX by PaddlePaddle 数据集准备 下载COCO数据集,准备为如下路径 /ho

QuanHao Guo 6 Dec 18, 2022
Attention-driven Robot Manipulation (ARM) which includes Q-attention

Attention-driven Robotic Manipulation (ARM) This codebase is home to: Q-attention: Enabling Efficient Learning for Vision-based Robotic Manipulation I

Stephen James 84 Dec 29, 2022
Posterior temperature optimized Bayesian models for inverse problems in medical imaging

Posterior temperature optimized Bayesian models for inverse problems in medical imaging Max-Heinrich Laves*, Malte Tölle*, Alexander Schlaefer, Sandy

Artificial Intelligence in Cardiovascular Medicine (AICM) 6 Sep 19, 2022
WORD: Revisiting Organs Segmentation in the Whole Abdominal Region

WORD: Revisiting Organs Segmentation in the Whole Abdominal Region. This repository provides the codebase and dataset for our work WORD: Revisiting Or

Healthcare Intelligence Laboratory 71 Jan 07, 2023