Dragonfly is an open source python library for scalable Bayesian optimisation.

Overview


Dragonfly is an open source python library for scalable Bayesian optimisation.

Bayesian optimisation is used for optimising black-box functions whose evaluations are usually expensive. Beyond vanilla optimisation techniques, Dragonfly provides an array of tools to scale up Bayesian optimisation to expensive large scale problems. These include features/functionality that are especially suited for high dimensional optimisation (optimising for a large number of variables), parallel evaluations in synchronous or asynchronous settings (conducting multiple evaluations in parallel), multi-fidelity optimisation (using cheap approximations to speed up the optimisation process), and multi-objective optimisation (optimising multiple functions simultaneously).

Dragonfly is compatible with Python2 (>= 2.7) and Python3 (>= 3.5) and has been tested on Linux, macOS, and Windows platforms. For documentation, installation, and a getting started guide, see our readthedocs page. For more details, see our paper.

 

Installation

See here for detailed instructions on installing Dragonfly and its dependencies.

Quick Installation: If you have done this kind of thing before, you should be able to install Dragonfly via pip.

$ sudo apt-get install python-dev python3-dev gfortran # On Ubuntu/Debian
$ pip install numpy
$ pip install dragonfly-opt -v

Testing the Installation: You can import Dragonfly in python to test if it was installed properly. If you have installed via source, make sure that you move to a different directory to avoid naming conflicts.

$ python
>>> from dragonfly import minimise_function
>>> # The first argument below is the function, the second is the domain, and the third is the budget.
>>> min_val, min_pt, history = minimise_function(lambda x: x ** 4 - x**2 + 0.1 * x, [[-10, 10]], 10);  
...
>>> min_val, min_pt
(-0.32122746026750953, array([-0.7129672]))

Due to stochasticity in the algorithms, the above values for min_val, min_pt may be different. If you run it for longer (e.g. min_val, min_pt, history = minimise_function(lambda x: x ** 4 - x**2 + 0.1 * x, [[-10, 10]], 100)), you should get more consistent values for the minimum.

If the installation fails or if there are warning messages, see detailed instructions here.

 

Quick Start

Dragonfly can be used directly in the command line by calling dragonfly-script.py or be imported in python code via the maximise_function function in the main library or in ask-tell mode. To help get started, we have provided some examples in the examples directory. See our readthedocs getting started pages (command line, Python, Ask-Tell) for examples and use cases.

Command line: Below is an example usage in the command line.

$ cd examples
$ dragonfly-script.py --config synthetic/branin/config.json --options options_files/options_example.txt

In Python code: The main APIs for Dragonfly are defined in dragonfly/apis. For their definitions and arguments, see dragonfly/apis/opt.py and dragonfly/apis/moo.py. You can import the main API in python code via,

from dragonfly import minimise_function, maximise_function
func = lambda x: x ** 4 - x**2 + 0.1 * x
domain = [[-10, 10]]
max_capital = 100
min_val, min_pt, history = minimise_function(func, domain, max_capital)
print(min_val, min_pt)
max_val, max_pt, history = maximise_function(lambda x: -func(x), domain, max_capital)
print(max_val, max_pt)

Here, func is the function to be maximised, domain is the domain over which func is to be optimised, and max_capital is the capital available for optimisation. The domain can be specified via a JSON file or in code. See here, here, here, here, here, here, here, here, here, here, and here for more detailed examples.

In Ask-Tell Mode: Ask-tell mode provides you more control over your experiments where you can supply past results to our API in order to obtain a recommendation. See the following example for more details.

For a comprehensive list of uses cases, including multi-objective optimisation, multi-fidelity optimisation, neural architecture search, and other optimisation methods (besides Bayesian optimisation), see our readthe docs pages (command line, Python, Ask-Tell)).

 

Contributors

Kirthevasan Kandasamy: github, webpage
Karun Raju Vysyaraju: github, linkedin
Anthony Yu: github, linkedin
Willie Neiswanger: github, webpage
Biswajit Paria: github, webpage
Chris Collins: github, webpage

Acknowledgements

Research and development of the methods in this package were funded by DOE grant DESC0011114, NSF grant IIS1563887, the DARPA D3M program, and AFRL.

Citation

If you use any part of this code in your work, please cite our JMLR paper.

@article{JMLR:v21:18-223,
  author  = {Kirthevasan Kandasamy and Karun Raju Vysyaraju and Willie Neiswanger and Biswajit Paria and Christopher R. Collins and Jeff Schneider and Barnabas Poczos and Eric P. Xing},
  title   = {Tuning Hyperparameters without Grad Students: Scalable and Robust Bayesian Optimisation with Dragonfly},
  journal = {Journal of Machine Learning Research},
  year    = {2020},
  volume  = {21},
  number  = {81},
  pages   = {1-27},
  url     = {http://jmlr.org/papers/v21/18-223.html}
}

License

This software is released under the MIT license. For more details, please refer LICENSE.txt.

For questions, please email [email protected].

"Copyright 2018-2019 Kirthevasan Kandasamy"

TensorFlow Decision Forests (TF-DF) is a collection of state-of-the-art algorithms for the training, serving and interpretation of Decision Forest models.

TensorFlow Decision Forests (TF-DF) is a collection of state-of-the-art algorithms for the training, serving and interpretation of Decision Forest models. The library is a collection of Keras models

538 Jan 01, 2023
MosaicML Composer contains a library of methods, and ways to compose them together for more efficient ML training

MosaicML Composer MosaicML Composer contains a library of methods, and ways to compose them together for more efficient ML training. We aim to ease th

MosaicML 2.8k Jan 06, 2023
scikit-fem is a lightweight Python 3.7+ library for performing finite element assembly.

scikit-fem is a lightweight Python 3.7+ library for performing finite element assembly. Its main purpose is the transformation of bilinear forms into sparse matrices and linear forms into vectors.

Tom Gustafsson 297 Dec 13, 2022
JMP is a Mixed Precision library for JAX.

Mixed precision training [0] is a technique that mixes the use of full and half precision floating point numbers during training to reduce the memory bandwidth requirements and improve the computatio

DeepMind 108 Dec 31, 2022
Built on python (Mathematical straight fit line coordinates error predictor machine learning foundational model)

Sum-Square_Error-Business-Analytical-Tool- Built on python (Mathematical straight fit line coordinates error predictor machine learning foundational m

om Podey 1 Dec 03, 2021
Transform ML models into a native code with zero dependencies

m2cgen (Model 2 Code Generator) - is a lightweight library which provides an easy way to transpile trained statistical models into a native code

Bayes' Witnesses 2.3k Jan 03, 2023
A modular active learning framework for Python

Modular Active Learning framework for Python3 Page contents Introduction Active learning from bird's-eye view modAL in action From zero to one in a fe

modAL 1.9k Dec 31, 2022
Dieses Projekt ermöglicht es den Smartmeter der EVN (Netz Niederösterreich) über die Kundenschnittstelle auszulesen.

SmartMeterEVN Dieses Projekt ermöglicht es den Smartmeter der EVN (Netz Niederösterreich) über die Kundenschnittstelle auszulesen. Smart Meter werden

greenMike 43 Dec 04, 2022
A project based example of Data pipelines, ML workflow management, API endpoints and Monitoring.

MLOps template with examples for Data pipelines, ML workflow management, API development and Monitoring.

Utsav 33 Dec 03, 2022
A GitHub action that suggests type annotations for Python using machine learning.

Typilus: Suggest Python Type Annotations A GitHub action that suggests type annotations for Python using machine learning. This action makes suggestio

40 Sep 18, 2022
MIT-Machine Learning with Python–From Linear Models to Deep Learning

MIT-Machine Learning with Python–From Linear Models to Deep Learning | One of the 5 courses in MIT MicroMasters in Statistics & Data Science Welcome t

2 Aug 23, 2022
MLOps pipeline project using Amazon SageMaker Pipelines

This project shows steps to build an end to end MLOps architecture that covers data prep, model training, realtime and batch inference, build model registry, track lineage of artifacts and model drif

AWS Samples 3 Sep 16, 2022
Massively parallel self-organizing maps: accelerate training on multicore CPUs, GPUs, and clusters

Somoclu Somoclu is a massively parallel implementation of self-organizing maps. It exploits multicore CPUs, it is able to rely on MPI for distributing

Peter Wittek 239 Nov 10, 2022
machine learning model deployment project of Iris classification model in a minimal UI using flask web framework and deployed it in Azure cloud using Azure app service

This is a machine learning model deployment project of Iris classification model in a minimal UI using flask web framework and deployed it in Azure cloud using Azure app service. We initially made th

Krishna Priyatham Potluri 73 Dec 01, 2022
A machine learning toolkit dedicated to time-series data

tslearn The machine learning toolkit for time series analysis in Python Section Description Installation Installing the dependencies and tslearn Getti

2.3k Jan 05, 2023
Climin is a Python package for optimization, heavily biased to machine learning scenarios

climin climin is a Python package for optimization, heavily biased to machine learning scenarios distributed under the BSD 3-clause license. It works

Biomimetic Robotics and Machine Learning at Technische Universität München 177 Sep 02, 2022
Python implementation of Weng-Lin Bayesian ranking, a better, license-free alternative to TrueSkill

Python implementation of Weng-Lin Bayesian ranking, a better, license-free alternative to TrueSkill This is a port of the amazing openskill.js package

Open Debates Project 156 Dec 14, 2022
Little Ball of Fur - A graph sampling extension library for NetworKit and NetworkX (CIKM 2020)

Little Ball of Fur is a graph sampling extension library for Python. Please look at the Documentation, relevant Paper, Promo video and External Resour

Benedek Rozemberczki 619 Dec 14, 2022
A Microsoft Azure Web App project named Covid 19 Predictor using Machine learning Model

A Microsoft Azure Web App project named Covid 19 Predictor using Machine learning Model (Random Forest Classifier Model ) that helps the user to identify whether someone is showing positive Covid sym

Priyansh Sharma 2 Oct 06, 2022
BudouX is the successor to Budou, the machine learning powered line break organizer tool.

BudouX Standalone. Small. Language-neutral. BudouX is the successor to Budou, the machine learning powered line break organizer tool. It is standalone

Google 868 Jan 05, 2023