WORD: Revisiting Organs Segmentation in the Whole Abdominal Region

Overview

WORD: Revisiting Organs Segmentation in the Whole Abdominal Region (Paper and DataSet).

  • [New] Note that all the emails about the download permission of WORD will be handled after the paper is accepted, all information will be updated in time in this repo, please don't send them multiple times!!!
  • This repo provides the codebase and dataset of work WORD: Revisiting Organs Segmentation in the Whole Abdominal Region, and the download requirement will be approved after the paper is accepted, stay tuned !!!
  • Now, we are preparing an online evaluation server for the fair and open research if you have experience with it or want to join or provide some support to this project, please contact us !!!
  • Some information about the WORD dataset is presented in the following:
Fig. 1. An example in the WORD dataset.
Fig. 2. Volume distribution or each organ in the WORD dataset.
Fig. 3. User study based on three junior oncologists independently, each of them comes from a different hospital.

DataSet

Please contact Xiangde (luoxd1996 AT gmail DOT com) for the dataset. Two steps are needed to download and access the dataset: 1) using your google email to apply for the download permission; 2) using your affiliation email to get the unzip password. We will get back to you after the paper is accepted. We just handle the real-name email and your email suffix must match your affiliation. The email should contain the following information:

Name/Homepage/Google Scholar: (Tell us who you are.)
Primary Affiliation: (The name of your institution or university, etc.)
Job Title: (E.g., Professor, Associate Professor, Ph.D., etc.)
Affiliation Email: (the password will be sent to this email, we just reply to the email which is the end of "edu".)
How to use: (Only for academic research, not for commercial use or second-development.)

In addition, this work is still ongoing, the WORD dataset will be extended to larger and more diverse (more patients, more organs, and more modalities, more clinical hospitals' data and MR Images will be considered to include future), any suggestion, comment, collaboration, and sponsor are welcome.

Acknowledgment and Statement

  • This dataset belongs to the Healthcare Intelligence Laboratory at University of Electronic Science and Technology of China and is licensed under the GNU General Public License v3.0.
  • This project has been approved by the privacy and ethical review committee. We thank all collaborators for the data collection, annotation, checking, and user study!
  • This project and dataset were designed for open-available academic research, not for clinical, commercial, second-development, or other use. In addition, if you used it for your academic research, you are encouraged to release the code and the pre-trained model.
  • The interesting and memorable name WORD is suggested by Dr. Jie-Neng, thanks a lot !!!

Citation

It would be highly appreciated if you cite our paper when using the WORD dataset or code:

@article{luo2021word,
  title={{WORD}: Revisiting Organs Segmentation in the Whole Abdominal Region},
  author={Luo, Xiangde and Liao, Wenjun and Xiao, Jianghong and Song, Tao and Zhang, Xiaofan and Li, Kang and Wang, Guotai and Zhang, Shaoting},
  journal={arXiv preprint arXiv:2111.02403},
  year={2021}
}
Owner
Healthcare Intelligence Laboratory
Healthcare Intelligence Laboratory
[IROS2021] NYU-VPR: Long-Term Visual Place Recognition Benchmark with View Direction and Data Anonymization Influences

NYU-VPR This repository provides the experiment code for the paper Long-Term Visual Place Recognition Benchmark with View Direction and Data Anonymiza

Automation and Intelligence for Civil Engineering (AI4CE) Lab @ NYU 22 Sep 28, 2022
[ECCV 2020] Reimplementation of 3DDFAv2, including face mesh, head pose, landmarks, and more.

Stable Head Pose Estimation and Landmark Regression via 3D Dense Face Reconstruction Reimplementation of (ECCV 2020) Towards Fast, Accurate and Stable

Remilia Scarlet 221 Dec 30, 2022
code for our paper "Source Data-absent Unsupervised Domain Adaptation through Hypothesis Transfer and Labeling Transfer"

SHOT++ Code for our TPAMI submission "Source Data-absent Unsupervised Domain Adaptation through Hypothesis Transfer and Labeling Transfer" that is ext

75 Dec 16, 2022
SMIS - Semantically Multi-modal Image Synthesis(CVPR 2020)

Semantically Multi-modal Image Synthesis Project page / Paper / Demo Semantically Multi-modal Image Synthesis(CVPR2020). Zhen Zhu, Zhiliang Xu, Anshen

316 Dec 01, 2022
OpenMMLab Pose Estimation Toolbox and Benchmark.

Introduction English | 简体中文 MMPose is an open-source toolbox for pose estimation based on PyTorch. It is a part of the OpenMMLab project. The master b

OpenMMLab 2.8k Dec 31, 2022
Machine Learning with JAX Tutorials

The purpose of this repo is to make it easy to get started with JAX. It contains my "Machine Learning with JAX" series of tutorials (YouTube videos and Jupyter Notebooks) as well as the content I fou

Aleksa Gordić 372 Dec 28, 2022
Flybirds - BDD-driven natural language automated testing framework, present by Trip Flight

Flybird | English Version 行为驱动开发(Behavior-driven development,缩写BDD),是一种软件过程的思想或者

Ctrip, Inc. 706 Dec 30, 2022
SwinTrack: A Simple and Strong Baseline for Transformer Tracking

SwinTrack This is the official repo for SwinTrack. A Simple and Strong Baseline Prerequisites Environment conda (recommended) conda create -y -n SwinT

LitingLin 196 Jan 04, 2023
Advancing mathematics by guiding human intuition with AI

Advancing mathematics by guiding human intuition with AI This repo contains two colab notebooks which accompany the paper, available online at https:/

DeepMind 315 Dec 26, 2022
Prior-Guided Multi-View 3D Head Reconstruction

Prior-Guided Head MVS This repository includes some reconstruction results of our IEEE TMM 2021 paper, Prior-Guided Multi-View 3D Head Reconstruction.

11 Aug 17, 2022
retweet 4 satoshi ⚡️

rt4sat retweet 4 satoshi This bot is the codebase for https://twitter.com/rt4sat please feel free to create an issue if you saw any bugs basically thi

6 Sep 30, 2022
LeViT a Vision Transformer in ConvNet's Clothing for Faster Inference

LeViT: a Vision Transformer in ConvNet's Clothing for Faster Inference This repository contains PyTorch evaluation code, training code and pretrained

Facebook Research 504 Jan 02, 2023
Creating predictive checklists from data using integer programming.

Learning Optimal Predictive Checklists A Python package to learn simple predictive checklists from data subject to customizable constraints. For more

Healthy ML 5 Apr 19, 2022
A set of tools for converting a darknet dataset to COCO format working with YOLOX

darknet格式数据→COCO darknet训练数据目录结构(详情参见dataset/darknet): darknet ├── class.names ├── gen_config.data ├── gen_train.txt ├── gen_valid.txt └── images

RapidAI-NG 148 Jan 03, 2023
Pytorch implementation of the AAAI 2022 paper "Cross-Domain Empirical Risk Minimization for Unbiased Long-tailed Classification"

[AAAI22] Cross-Domain Empirical Risk Minimization for Unbiased Long-tailed Classification We point out the overlooked unbiasedness in long-tailed clas

PatatiPatata 28 Oct 18, 2022
The source code for Generating Training Data with Language Models: Towards Zero-Shot Language Understanding.

SuperGen The source code for Generating Training Data with Language Models: Towards Zero-Shot Language Understanding. Requirements Before running, you

Yu Meng 38 Dec 12, 2022
Scale-aware Automatic Augmentation for Object Detection (CVPR 2021)

SA-AutoAug Scale-aware Automatic Augmentation for Object Detection Yukang Chen, Yanwei Li, Tao Kong, Lu Qi, Ruihang Chu, Lei Li, Jiaya Jia [Paper] [Bi

DV Lab 182 Dec 29, 2022
PyTorch Implementations for DeeplabV3 and PSPNet

Pytorch-segmentation-toolbox DOC Pytorch code for semantic segmentation. This is a minimal code to run PSPnet and Deeplabv3 on Cityscape dataset. Shor

Zilong Huang 746 Dec 15, 2022
A large-scale database for graph representation learning

A large-scale database for graph representation learning

Scott Freitas 29 Nov 25, 2022
Official code repository for ICCV 2021 paper: Gravity-Aware Monocular 3D Human Object Reconstruction

GraviCap Official code repository for ICCV 2021 paper: Gravity-Aware Monocular 3D Human Object Reconstruction. Gravity-Aware Monocular 3D Human-Object

Rishabh Dabral 15 Dec 09, 2022