Statistical Rethinking course winter 2022

Overview

Statistical Rethinking (2022 Edition)

Instructor: Richard McElreath

Lectures: Uploaded <Playlist> and pre-recorded, two per week

Discussion: Online, Fridays 3pm-4pm Central European Time

Purpose

This course teaches data analysis, but it focuses on scientific models first. The unfortunate truth about data is that nothing much can be done with it, until we say what caused it. We will prioritize conceptual, causal models and precise questions about those models. We will use Bayesian data analysis to connect scientific models to evidence. And we will learn powerful computational tools for coping with high-dimension, imperfect data of the kind that biologists and social scientists face.

Format

Online, flipped instruction. The lectures are pre-recorded. We'll meet online once a week for an hour to work through the solutions to the assigned problems.

We'll use the 2nd edition of my book, <Statistical Rethinking>. I'll provide a PDF of the book to enrolled students.

Registration: Please sign up via <[COURSE IS FULL SORRY]>. I've also set aside 100 audit tickets at the same link, for people who want to participate, but who don't need graded work and course credit.

Calendar & Topical Outline

There are 10 weeks of instruction. Links to lecture recordings will appear in this table. Weekly problem sets are assigned on Fridays and due the next Friday, when we discuss the solutions in the weekly online meeting.

Lecture playlist on Youtube: <Statistical Rethinking 2022>

Week ## Meeting date Reading Lectures
Week 01 07 January Chapters 1, 2 and 3 [1] <The Golem of Prague> <(Slides)>
[2] <Bayesian Inference> <(Slides)>
Week 02 14 January Chapters 4 and 5 [3] <Basic Regression> <(Slides)>
[4] <Categories & Curves> <(Slides)>
Week 03 21 January Chapters 5 and 6 [5] <Elemental Confounds> <(Slides)>
[6] <Good & Bad Controls> <(Slides)>
Week 04 28 January Chapters 7 and 8 [7] Overfitting
[8] Interactions
Week 05 04 February Chapters 9, 10 and 11 [9] Markov chain Monte Carlo
[10] Binomial GLMs
Week 06 11 February Chapters 11 and 12 [11] Poisson GLMs
[12] Ordered Categories
Week 07 18 February Chapter 13 [13] Multilevel Models
[14] Multi-Multilevel Models
Week 08 25 February Chapter 14 [15] Varying Slopes
[16] Gaussian Processes
Week 09 04 March Chapter 15 [17] Measurement Error
[18] Missing Data
Week 10 11 March Chapters 16 and 17 [19] Beyond GLMs: State-space Models, ODEs
[20] Horoscopes

Coding

This course involves a lot of scripting. Students can engage with the material using either the original R code examples or one of several conversions to other computing environments. The conversions are not always exact, but they are rather complete. Each option is listed below.

Original R Flavor

For those who want to use the original R code examples in the print book, you need to install the rethinking R package. The code is all on github https://github.com/rmcelreath/rethinking/ and there are additional details about the package there, including information about using the more-up-to-date cmdstanr instead of rstan as the underlying MCMC engine.

R + Tidyverse + ggplot2 + brms

The <Tidyverse/brms> conversion is very high quality and complete through Chapter 14.

Python and PyMC3

The <Python/PyMC3> conversion is quite complete.

Julia and Turing

The <Julia/Turing> conversion is not as complete, but is growing fast and presents the Rethinking examples in multiple Julia engines, including the great <TuringLang>.

Other

The are several other conversions. See the full list at https://xcelab.net/rm/statistical-rethinking/.

Homework and solutions

I will also post problem sets and solutions. Check the folders at the top of the repository.

Owner
Richard McElreath
Richard McElreath
Data Analysis for First Year Laboratory at Imperial College, London.

Data Analysis for First Year Laboratory at Imperial College, London. For personal reference only, and to reference in lab reports and lab books.

Martin He 0 Aug 29, 2022
Hydrogen (or other pure gas phase species) depressurization calculations

HydDown Hydrogen (or other pure gas phase species) depressurization calculations This code is published under an MIT license. Install as simple as: pi

Anders Andreasen 13 Nov 26, 2022
PandaPy has the speed of NumPy and the usability of Pandas 10x to 50x faster (by @firmai)

PandaPy "I came across PandaPy last week and have already used it in my current project. It is a fascinating Python library with a lot of potential to

Derek Snow 527 Jan 02, 2023
This repo contains a simple but effective tool made using python which can be used for quality control in statistical approach.

This repo contains a powerful tool made using python which is used to visualize, analyse and finally assess the quality of the product depending upon the given observations

SasiVatsal 8 Oct 18, 2022
Active Learning demo using two small datasets

ActiveLearningDemo How to run step one put the dataset folder and use command below to split the dataset to the required structure run utils.py For ea

3 Nov 10, 2021
Clean and reusable data-sciency notebooks.

KPACUBO KPACUBO is a set Jupyter notebooks focused on the best practices in both software development and data science, namely, code reuse, explicit d

Matvey Morozov 1 Jan 28, 2022
A real-time financial data streaming pipeline and visualization platform using Apache Kafka, Cassandra, and Bokeh.

Realtime Financial Market Data Visualization and Analysis Introduction This repo shows my project about real-time stock data pipeline. All the code is

6 Sep 07, 2022
AWS Glue ETL Code Samples

AWS Glue ETL Code Samples This repository has samples that demonstrate various aspects of the new AWS Glue service, as well as various AWS Glue utilit

AWS Samples 1.2k Jan 03, 2023
Automated Exploration Data Analysis on a financial dataset

Automated EDA on financial dataset Just a simple way to get automated Exploration Data Analysis from financial dataset (OHLCV) using Streamlit and ta.

Darío López Padial 28 Nov 27, 2022
Bigdata Simulation Library Of Dream By Sandman Books

BIGDATA SIMULATION LIBRARY OF DREAM BY SANDMAN BOOKS ================= Solution Architecture Description In the realm of Dreaming, its ruler SANDMAN,

Maycon Cypriano 3 Jun 30, 2022
Accurately separate the TLD from the registered domain and subdomains of a URL, using the Public Suffix List.

tldextract Python Module tldextract accurately separates the gTLD or ccTLD (generic or country code top-level domain) from the registered domain and s

John Kurkowski 1.6k Jan 03, 2023
A script to "SHUA" H1-2 map of Mercenaries mode of Hearthstone

lushi_script Introduction This script is to "SHUA" H1-2 map of Mercenaries mode of Hearthstone Installation Make sure you installed python=3.6. To in

210 Jan 02, 2023
For making Tagtog annotation into csv dataset

tagtog_relation_extraction for making Tagtog annotation into csv dataset How to Use On Tagtog 1. Go to Project Downloads 2. Download all documents,

hyeong 4 Dec 28, 2021
The micro-framework to create dataframes from functions.

The micro-framework to create dataframes from functions.

Stitch Fix Technology 762 Jan 07, 2023
Elementary is an open-source data reliability framework for modern data teams. The first module of the framework is data lineage.

Data lineage made simple, reliable, and automated. Effortlessly track the flow of data, understand dependencies and analyze impact. Features Visualiza

898 Jan 09, 2023
Improving your data science workflows with

Make Better Defaults Author: Kjell Wooding [email protected] This is the git re

Kjell Wooding 18 Dec 23, 2022
OpenDrift is a software for modeling the trajectories and fate of objects or substances drifting in the ocean, or even in the atmosphere.

opendrift OpenDrift is a software for modeling the trajectories and fate of objects or substances drifting in the ocean, or even in the atmosphere. Do

OpenDrift 167 Dec 13, 2022
Business Intelligence (BI) in Python, OLAP

Open Mining Business Intelligence (BI) Application Server written in Python Requirements Python 2.7 (Backend) Lua 5.2 or LuaJIT 5.1 (OML backend) Mong

Open Mining 1.2k Dec 27, 2022
Analysis of a dataset of 10000 passwords to find common trends and mistakes people generally make while setting up a password.

Analysis of a dataset of 10000 passwords to find common trends and mistakes people generally make while setting up a password.

Aryan Raj 7 Sep 04, 2022