Fixes 500+ mislabeled MURA images

Overview

Better-MURA

In this repository, new csv files are provided that fixes 500+ mislabeled MURA x-rays for all categories. The mislabeled x-rays mainly had hardware in them. This project only fixes the false negatives for now.

Category Total negative x-rays test Wrongly classified Total negative x-rays valid Wrongly classified
Elbow 2925 65 235 4
Finger 3138 31 214 7
Forearm 1164 43 150 4
Hand 4059 15 271 3
Humerus 673 28 148 15
Shoulder 4211 241 285 12
Wrist 4072 73 364 8
Total 20242 496 1667 53

Code is provided to fix the directory names with the new labels.

Usage

  1. Download or GIT clone repository.
  2. Put MURA-v1.11 train and valid folders in this directory.
  3. python renamer.py
  4. When the program finishes the folders are now named according to the new csv files

Contribution

Help with this project will be greatly appreciated! If you see a false positive or false negative that isn't already in changed_studies.txt, it would be appreciated if you made a pull request fixing them. Right now this project focusses only on false negatives, so if someone who is qualified and is willing to help fix the false positives, you can send me a message. Together we can make MURA better :)

Owner
Pieter Zeilstra
M-CS student at University of Twente
Pieter Zeilstra
SALaD (Semi-Automatic Landslide Detection) is a landslide mapping system

SALaD (Semi-Automatic Landslide Detection) is a landslide mapping system. SALaD utilizes Object-based Image Analysis and Random Forest to map landslides.

NASA 14 Jan 04, 2023
BeeRef — A Simple Reference Image Viewer

BeeRef — A Simple Reference Image Viewer BeeRef lets you quickly arrange your reference images and view them while you create. Its minimal interface i

Rebecca 245 Dec 25, 2022
Generate waves art for an image

waves-art Generate waves art for an image. Requirements: OpenCV Numpy Example Usage python waves_art.py --image_path tests/test1.jpg --patch_size 15 T

Hamza Rawal 18 Apr 04, 2022
Python binding to Skia Graphics Library

Skia python binding Python binding to Skia Graphics Library. Binding based on pybind11. Currently, the binding is under active development. Install Bi

Kota Yamaguchi 170 Jan 06, 2023
A Python3 library to generate dynamic SVGs

The Python library for generating dynamic SVGs using Python3

1 Dec 23, 2021
A Robust Avatar Generator with a huge number of templates

CoolAvatars Welcome to this repository of CoolAvatars. Using this project, you can generate cool avatars not only from the samples present in my image

RAVI PRAKASH 5 Oct 12, 2021
Create a random fluent image based on multiple colors.

FluentGenerator Create a random fluent image based on multiple colors. Navigation Example Install Update Usage In Python console FluentGenerator Fluen

1 Feb 02, 2022
LabelMe annotation tool source code

LabelMe annotation tool source code Here you will find the source code to install the LabelMe annotation tool on your server. LabelMe is an annotation

MIT CSAIL Computer Vision 1.3k Jan 03, 2023
📷 Python package and CLI utility to create photo mosaics.

📷 Python package and CLI utility to create photo mosaics.

Loic Coyle 7 Oct 29, 2022
Small wrapper around 3dmol.js and html2canvas for creating self-contained HTML files that display a 3D molecular representation.

Description Small wrapper around 3dmol.js and html2canvas for creating self-contained HTML files that display a 3D molecular representation. Double cl

David Meijer 1 Dec 02, 2021
㊙️ Create standard barcodes with Python. No external dependencies. 100% Organic Python.

python-barcode python-barcode provides a simple way to create barcodes in Python. There are no external dependencies when generating SVG files. Pillow

Hugo Barrera 419 Dec 26, 2022
A simple plugin to view APR images in napari

napari-apr-viewer A simple plugin to view APR images in napari This napari plugin was generated with Cookiecutter using @napari's cookiecutter-napari-

5 Jan 24, 2022
Xmas-Tree-GIF-Tool - Convert any given animated gif file into an animation in GIFT CSV format

This repo is made to participate in Matt Parker's XmasTree 2021 event. Convert a

Aven Zitzelberger 2 Dec 30, 2021
Labelme is a graphical image annotation tool, It is written in Python and uses Qt for its graphical interface

Image Polygonal Annotation with Python (polygon, rectangle, circle, line, point and image-level flag annotation).

Kentaro Wada 9.6k Jan 09, 2023
QSIprep: Preprocessing and analysis of q-space images

QSIprep: Preprocessing and analysis of q-space images Full documentation at https://qsiprep.readthedocs.io About qsiprep configures pipelines for proc

Lifespan Informatics and Neuroimaging Center 88 Dec 15, 2022
A minimal, standalone viewer for 3D animations stored as stop-motion sequences of individual .obj mesh files.

ObjSequenceViewer V0.5 A minimal, standalone viewer for 3D animations stored as stop-motion sequences of individual .obj mesh files. Installation: pip

csmailis 2 Aug 04, 2022
Digital image process Basic algorithm

These are some basic algorithms that I have implemented by my hands in the process of learning digital image processing, such as mean and median filtering, sharpening algorithms, interpolation scalin

JingYu 2 Nov 03, 2022
QR-Generator - An awesome QR Generator to create or customize your QR's

QR Generator An awesome QR Generator to create or customize your QR's! Table of

Tristán 1 Jan 28, 2022
Create a static HTML/CSS image gallery from a bunch of images.

gallerize Create a static HTML/CSS image gallery from a bunch of images.

Jochen Kupperschmidt 19 Aug 21, 2022
Plots is a graph plotting app for GNOME.

Plots is a graph plotting app for GNOME. Plots makes it easy to visualise mathematical formulae. In addition to basic arithmetic operations, it supports trigonometric, hyperbolic, exponential and log

Alex Huntley 138 Dec 14, 2022