proof-of-concept running docker container from omero web

Overview

docker-from-omero-poc

proof-of-concept running docker container from omero web

How-to

  • Edit test_script.py so that the BaseClient is created pointing to the correct hostname
  • Build the Dockerfile in your server (I used docker build -t test-omero . from the repo directory)
  • If you built it using a different container name, edit it on omero_post_kvpair.py so that docker runs the correct container
  • Upload omero_post_kvpair.py as an OMERO script (omero script upload omero_post_kvpair.py --official)
  • Make sure your OMERO user can run docker (it might need to be added to the docker group on your Linux system)
Owner
Erick Martins Ratamero
Erick Martins Ratamero
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