A Pythonic introduction to methods for scaling your data science and machine learning work to larger datasets and larger models, using the tools and APIs you know and love from the PyData stack (such as numpy, pandas, and scikit-learn).

Overview

Binder

Note: This repository is currently a work in progress. If you are joining for any given tutorial, please make sure to clone // pull the repository 2 hours before the tutorial begins.

Material for any given tutorial will be in the notebooks directory: for example, material for the Data Umbrella & PyLadies NYC tutorial on October 27, is in a subdirectort of /notebooks called /data-umbrella-2020-10-27.

Data Science At Scale

This tutorial's purpose is to introduce Pythonistas to methods for scaling their data science and machine learning work to larger datasets and larger models, using the tools and APIs they know and love from the PyData stack (such as numpy, pandas, and scikit-learn).

Prerequisites

Not a lot. It would help if you knew

  • programming fundamentals and the basics of the Python programming language (e.g., variables, for loops);
  • a bit about pandas, numpy, and scikit-learn (although not strictly necessary);
  • a bit about Jupyter Notebooks;
  • your way around the terminal/shell.

However, I have always found that the most important and beneficial prerequisite is a will to learn new things so if you have this quality, you'll definitely get something out of this code-along session.

Also, if you'd like to watch and not code along, you'll also have a great time and these notebooks will be downloadable afterwards also.

If you are going to code along and use the Anaconda distribution of Python 3 (see below), I ask that you install it before the session.

Getting set up computationally

Binder

The first option is to click on the Binder badge above. This will spin up the necessary computational environment for you so you can write and execute Python code from the comfort of your browser. Binder is a free service. Due to this, the resources are not guaranteed, though they usually work well. If you want as close to a guarantee as possible, follow the instructions below to set up your computational environment locally (that is, on your own computer). Note that Binder will not work for all of the notebooks, particularly when we spin up Coiled Cloud. For these, you can follow along or set up your local environment as detailed below.

1. Clone the repository

To get set up for this live coding session, clone this repository. You can do so by executing the following in your terminal:

git clone https://github.com/coiled/data-science-at-scale

Alternatively, you can download the zip file of the repository at the top of the main page of the repository. If you prefer not to use git or don't have experience with it, this a good option.

2. Download Anaconda (if you haven't already)

If you do not already have the Anaconda distribution of Python 3, go get it (n.b., you can also do this w/out Anaconda using pip to install the required packages, however Anaconda is great for Data Science and I encourage you to use it).

3. Create your conda environment for this session

Navigate to the relevant directory data-science-at-scale and install required packages in a new conda environment:

conda env create -f binder/environment.yml

This will create a new environment called data-science-at-scale. To activate the environment on OSX/Linux, execute

source activate data-science-at-scale

On Windows, execute

activate data-science-at-scale

Then execute the following to get all the great Jupyter // Bokeh // Dask dashboarding tools.

jupyter labextension install @jupyter-widgets/jupyterlab-manager
jupyter labextension install @bokeh/jupyter_bokeh
jupyter labextension install dask-labextension

4. Open your Jupyter Lab

In the terminal, execute jupyter lab.

Then open the notebook 0-overview.ipynb in the relevant subdirectory of /notebooks and we're ready to get coding. Enjoy.

Owner
Coiled
Scalable Python with Dask
Coiled
CRISP: Critical Path Analysis of Microservice Traces

CRISP: Critical Path Analysis of Microservice Traces This repo contains code to compute and present critical path summary from Jaeger microservice tra

Uber Research 110 Jan 06, 2023
A set of procedures that can realize covid19 virus detection based on blood.

A set of procedures that can realize covid19 virus detection based on blood.

Nuyoah-xlh 3 Mar 07, 2022
Hatchet is a Python-based library that allows Pandas dataframes to be indexed by structured tree and graph data.

Hatchet Hatchet is a Python-based library that allows Pandas dataframes to be indexed by structured tree and graph data. It is intended for analyzing

Lawrence Livermore National Laboratory 14 Aug 19, 2022
PandaPy has the speed of NumPy and the usability of Pandas 10x to 50x faster (by @firmai)

PandaPy "I came across PandaPy last week and have already used it in my current project. It is a fascinating Python library with a lot of potential to

Derek Snow 527 Jan 02, 2023
Data exploration done quick.

Pandas Tab Implementation of Stata's tabulate command in Pandas for extremely easy to type one-way and two-way tabulations. Support: Python 3.7 and 3.

W.D. 20 Aug 27, 2022
📊 Python Flask game that consolidates data from Nasdaq, allowing the user to practice buying and selling stocks.

Web Trader Web Trader is a trading website that consolidates data from Nasdaq, allowing the user to search up the ticker symbol and price of any stock

Paulina Khew 21 Aug 30, 2022
Tablexplore is an application for data analysis and plotting built in Python using the PySide2/Qt toolkit.

Tablexplore is an application for data analysis and plotting built in Python using the PySide2/Qt toolkit.

Damien Farrell 81 Dec 26, 2022
ped-crash-techvol: Texas Ped Crash Tech Volume Pack

ped-crash-techvol: Texas Ped Crash Tech Volume Pack In conjunction with the Final Report "Identifying Risk Factors that Lead to Increase in Fatal Pede

Network Modeling Center; Center for Transportation Research; The University of Texas at Austin 2 Sep 28, 2022
Toolchest provides APIs for scientific and bioinformatic data analysis.

Toolchest Python Client Toolchest provides APIs for scientific and bioinformatic data analysis. It allows you to abstract away the costliness of runni

Toolchest 11 Jun 30, 2022
Powerful, efficient particle trajectory analysis in scientific Python.

freud Overview The freud Python library provides a simple, flexible, powerful set of tools for analyzing trajectories obtained from molecular dynamics

Glotzer Group 195 Dec 20, 2022
Validated, scalable, community developed variant calling, RNA-seq and small RNA analysis

Validated, scalable, community developed variant calling, RNA-seq and small RNA analysis. You write a high level configuration file specifying your in

Blue Collar Bioinformatics 917 Jan 03, 2023
A DSL for data-driven computational pipelines

"Dataflow variables are spectacularly expressive in concurrent programming" Henri E. Bal , Jennifer G. Steiner , Andrew S. Tanenbaum Quick overview Ne

1.9k Jan 03, 2023
An interactive grid for sorting, filtering, and editing DataFrames in Jupyter notebooks

qgrid Qgrid is a Jupyter notebook widget which uses SlickGrid to render pandas DataFrames within a Jupyter notebook. This allows you to explore your D

Quantopian, Inc. 2.9k Jan 08, 2023
Spectral Analysis in Python

SPECTRUM : Spectral Analysis in Python contributions: Please join https://github.com/cokelaer/spectrum contributors: https://github.com/cokelaer/spect

Thomas Cokelaer 280 Dec 16, 2022
Data Analysis for First Year Laboratory at Imperial College, London.

Data Analysis for First Year Laboratory at Imperial College, London. For personal reference only, and to reference in lab reports and lab books.

Martin He 0 Aug 29, 2022
Utilize data analytics skills to solve real-world business problems using Humana’s big data

Humana-Mays-2021-HealthCare-Analytics-Case-Competition- The goal of the project is to utilize data analytics skills to solve real-world business probl

Yongxian (Caroline) Lun 1 Dec 27, 2021
Active Learning demo using two small datasets

ActiveLearningDemo How to run step one put the dataset folder and use command below to split the dataset to the required structure run utils.py For ea

3 Nov 10, 2021
Pizza Orders Data Pipeline Usecase Solved by SQL, Sqoop, HDFS, Hive, Airflow.

PizzaOrders_DataPipeline There is a Tony who is owning a New Pizza shop. He knew that pizza alone was not going to help him get seed funding to expand

Melwin Varghese P 4 Jun 05, 2022
Extract Thailand COVID-19 Cluster data from daily briefing pdf.

Thailand COVID-19 Cluster Data Extraction About Extract Clusters from Thailand Daily COVID-19 briefing PDF Download latest data Here. Data will be upd

Noppakorn Jiravaranun 5 Sep 27, 2021
bigdata_analyse 大数据分析项目

bigdata_analyse 大数据分析项目 wish 采用不同的技术栈,通过对不同行业的数据集进行分析,期望达到以下目标: 了解不同领域的业务分析指标 深化数据处理、数据分析、数据可视化能力 增加大数据批处理、流处理的实践经验 增加数据挖掘的实践经验

Way 2.4k Dec 30, 2022