Multi-Probe Attention for Semantic Indexing

Related tags

MiscellaneousMPANN
Overview

Multi-Probe Attention for Semantic Indexing

About

This project is developed for the topic of COVID-19 semantic indexing.

Directories & files

A. The directory of the raw CovSI Corpus: './data/covid19/'
B. The directory of the MeSH vocabulary: './data/MeSH/'
C. Source code modules: './biosemin/*'
D. Main script file : './run_mpann.py'
E. Initialization models: './model/'
F. Output directory: './output/'

==============================================================

Updates for BioASQ 2021 Task9a

  1. The project has been updated to be compatable with the BIOASQ 2021 Task9a dataset.
  2. The code has been modified to follow the typical structure of the pre-trained transformer encoder and is able to be initalized with BERT-based models.
  3. BioASQ Task9a dataset:
    (a) Training set: The original compressed file of the BioASQ Task9a training set consists of more than 15 million articles with the size of around 20G, and should be download from the BioASQ official website
    (b) Test set: The BioASQ Task9a test set is comprised of more than 90k aritcles and split into 15 different batches. The Task9a test set should be download from the BioASQ official website
    (c) Since the some MeSH annotations are missed in parts of the articles in the BioASQ Task9a test set and some PMIDs are invalid or deprecated, we filtered these abnormal articles and added necessary candidate labels for prediction. The filtered test dataset locates at './data/bioasq2021/test_filtered/'
  4. The script 'shell_bioasq2021.sh' for prediction on the BioASQ Task9a test is added.
Owner
Jinghang Gu
Jinghang Gu
This script can be used to get unlimited Gb for WARP.

Warp-Unlimited-GB This script can be used to get unlimited Gb for WARP. How to use Change the value of the 'referrer' to warp id of yours You can down

Anix Sam Saji 1 Feb 14, 2022
Participants of Bertelsmann Technology Scholarship created an awesome list of resources and they want to share it with the world, if you find illegal resources please report to us and we will remove.

Participants of Bertelsmann Technology Scholarship created an awesome list of resources and they want to share it with the world, if you find illegal

Wissem Marzouki 29 Nov 28, 2022
Goddard A collection of small, simple strategies for Freqtrade

Goddard A collection of small, simple strategies for Freqtrade. Simply add the strategy you choose in your strategies folder and run. ⚠️ General Crypt

Shane Jones 118 Dec 14, 2022
Simple AoC helper program you can use to develop your own solutions in python.

AoC-Compabion Simple AoC helper program you can use to develop your own solutions in python. Simply install it in your python environment using pip fr

Alexander Vollmer 1 Dec 20, 2021
Solcast Integration for Home Assistant

Solcast Solar Home Assistant(https://www.home-assistant.io/) Component This custom component integrates the Solcast API into Home Assistant. Modified

Greg 45 Dec 20, 2022
A Klipper plugin for accurate Z homing

Stable Z Homing for Klipper A Klipper plugin for accurate Z homing This plugin provides a new G-code command, STABLE_Z_HOME, which homes Z repeatedly

Matthew Lloyd 24 Dec 28, 2022
A small script I made that takes any standard Decklist of magic the gathering cards and pulls all card images from scryfall at once!

A small script I made that takes any standard Decklist of magic the gathering cards and pulls all card images from scryfall at once!

15 Aug 26, 2022
Click2call for asterisk with python

Click2call para Asterisk com Python Este projeto disponibiliza uma API construíd

Benedito Marques 1 Jan 17, 2022
MODeflattener deobfuscates control flow flattened functions obfuscated by OLLVM using Miasm.

MODeflattener deobfuscates control flow flattened functions obfuscated by OLLVM using Miasm.

Suraj Malhotra 138 Jan 07, 2023
Python / C++ based particle reaction-diffusion simulator

ReaDDy (Reaction Diffusion Dynamics) is an open source particle based reaction-diffusion simulator that can be configured and run via Python. Currentl

ReaDDy 46 Dec 09, 2022
Fiber implements an proof-of-concept Python decorator that rewrites a function

Fiber implements an proof-of-concept Python decorator that rewrites a function so that it can be paused and resumed (by moving stack variables to a heap frame and adding if statements to simulate jum

Tyler Hou 225 Dec 13, 2022
This repo contains scripts that add functionality to xbar.

xbar-custom-plugins This repo contains scripts that add functionality to xbar. Usage You have to add scripts to xbar plugin folder. If you don't find

osman uygar 1 Jan 10, 2022
Final project in KAIST AI class

mmodal_mixer MLP-Mixer based Multi-modal image-text retrieval Image: Original image is cropped with 16 x 16 patch size without overlap. Then, it is re

SuperSuperMoon 5 May 30, 2022
Trackthis - This library can be used to track USPS and UPS shipments.

Trackthis - This library can be used to track USPS and UPS shipments. It has the option of returning the raw API response, or optionally, it can be used to standardize the USPS and UPS responses so t

Aaron Guzman 0 Mar 29, 2022
A Python wrapper for Matrix Synapse admin API

Synapse-admin-api-python A Python wrapper for Matrix Synapse admin API. Versioning This library now supports up to Synapse 1.45.0, any Admin API intro

Knugi 9 Sep 28, 2022
A bot to view Dilbert comics directly from Discord and get updates of the comics automatically.

A bot to view Dilbert comics directly from Discord and get updates of the comics automatically

Raghav Sharma 3 Nov 30, 2022
Ml-design-patterns - Source code accompanying O'Reilly book: Machine Learning Design Patterns

This is not an official Google product ml-design-patterns Source code accompanying O'Reilly book: Title: Machine Learning Design Patterns Authors: Val

Google Cloud Platform 1.5k Jan 05, 2023
Video Stream is an Advanced Telegram Bot that's allow you to play Video & Music on Telegram Group Video Chat

Video Stream is an Advanced Telegram Bot that's allow you to play Video & Music on Telegram Group Video Chat 📊 Stats 🧪 Get SESSION_NAME from below:

dark phoenix 12 May 08, 2022
A price calculator for multiple things

Price Calculator A price calculator for multiple things Example I have 0.0567kg diamond. The price of diamond in kg is: $4500. Then it says: The price

Abel 1 Nov 26, 2021
A utility control surface for Ableton Live that makes the initialization of a Mixdown quick

Automate Mixdown initialization A script that transfers all the VSTs on your MIDI tracks to a new track so you can freeze your MIDI tracks and then co

Aarnav 0 Feb 23, 2022